Doktorandské kolokvium KAI - Filip Kerák (18.3.2024)
v pondelok 18.3.2024 o 13:10 hod. v miestnosti I/9
Prednášajúci: Filip Kerák
Názov: Modeling nanopore signals
Termín: 18.3.2024, 13:10 hod., I/9
Abstrakt:
While sequencing DNA or RNA with nanopore, the sequencing machine outputs a signal that is later translated to a string over alphabet {A,C,G,T} using machine learning approaches. It has been shown that current approaches to this problem lead to systematic errors in recovered sequences, hindering the downstream analysis. The goal is to develop new methods that can characterize and identify such biases through probabilistic modeling and machine learning.